Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015848373.1_cds_XP_016510367.1_23208
CDS Infomation

[gene=LOC107827696] [db_xref=GeneID:107827696] [protein=EGF domain-specific O-linked N-acetylglucosamine transferase-like] [protein_id=XP_016510367.1] [location=join(527..701,786..857,1437..2734)] [gbkey=CDS]
Sequence

ATGTGCAAGAAAATGATGCATTATAAGAGATATCAGCACTGGAGTAAAAAAGAAGATGTG
TTTGTGGTTTGTGTAGATGAAGAACTAAACTCTGGTTATAATTGCAAGAGAGCTAAACCA
AAACTTTTTTACCTTCTTTTCCTTTCTTTAATCTCTTTCAGCTTTATTTTCTTGTATTCA
TTTAGTTCTGAAGAAGGTGGACTTGTTCCTAAAACAGATATAAATTCTTGTTCCTCCGTC
TCTAACGGGACAATTTGTTGTGAAAGAAGCAGTATTCGCTCCGATGTATGTGTAATGAAA
GGTGATGTTAGGACTGGTTCTGCTTCCTCTAGAATTACCCTCTACAGAAATAATGGTCAT
AGCGATTATGTGTTGCGCGATCCTGATGAGAATGACGAGGTACTTCAGCATGAAAAGATT
AGGCCGTATACTCGGAAATGGGAAAAGAATGTGATGGATACCATTGATGAGTTAGACCTT
GTTGTGAAAGGGAAGTATTATGGCGTTCGCCAAAAGTGTGATGTCGAACATGATGTTCCT
GCTATATTTTTCTCTACTGGAGGTTATACCGGTAATCTTTACCACGAGTTCAACGATGGA
CTCTTGCCCCTTTACATCACTTCTCAGCACTTCAACAAGAAGGTTGTGTTTGTAATCCTT
GAGTACCATAATTGGTGGATAATGAAGTACGAGAATGTTCTTTCTCACCTCACCGAATAT
CCTATTATAGACTTTAGCGGAGATAAGAGGACTCATTGCTTCCCTGAAGCTATAGTTGGT
TCAAGAATCCACGATGAGCTAACTGTTGATCCTTCATTGATGGGAAACAATAAGACGATT
AGAGATTTCAGAGACCTTCTAGATCGAGCTTATTGGCCTCGAATTAGAGGTTTGATCCAA
GATGAGGAACGTGAAGCTCGGATGAATAAAGAAAAACTTGTTTCGTCACCCTCATCTGAG
TCAAAGATGGTGGCGACGGAAGAAAAGAAGGATTTGAAGAAGCCTAAAGTGGTCATAATA
GCGAGAAATGATTCTAGAGCTATAATGAACGAAGATTCTTTGGTTAAAATGATCGAAGAT
ATTGGGTTTCATGTAGAAGTTTTGAGGCCACAACGAACGACAGAGCTTGCAAGGATCTAT
CGAGTCCTTAATTCGAGTGATGTTATGATAGGAGTTCACGGTGCTGCTATGACTCATTTC
CTCTTCATGAGGCCTGGTTCTGTTTTCATCCAAATCATTCCGCTCGGAACAGATTGGGCA
GCAGGCACTTATTATGGAGAACCAGCAGTGAAACTAGGTCTCAAGTACATCGGATACAAA
ATTCTTCCGAAAGAGAGCTCTTTGTATGATGAATACGACAAGAATGATCCCGTCCTGATG
GACCCTAACAGCGTGAATGACAGAGGATGGGAATTCACAAAAAAGATCTACCTTGATCGT
CAAAATGTGAGGTTGAATCTTGGAAGGTTTCGTAAAAGATTGCTTCGCGCCTACTATCAT
TCTGTTGCTAATGAAAATGAGCGTCTTCGTCGTCAAAGTCAGTAA

Peptide Sequence

PEP ID

XP_016510367.1
PEP Infomation

PREDICTED: EGF domain-specific O-linked N-acetylglucosamine transferase-like [Nicotiana tabacum]
Sequence

MCKKMMHYKRYQHWSKKEDVFVVCVDEELNSGYNCKRAKPKLFYLLFLSLISFSFIFLYS
FSSEEGGLVPKTDINSCSSVSNGTICCERSSIRSDVCVMKGDVRTGSASSRITLYRNNGH
SDYVLRDPDENDEVLQHEKIRPYTRKWEKNVMDTIDELDLVVKGKYYGVRQKCDVEHDVP
AIFFSTGGYTGNLYHEFNDGLLPLYITSQHFNKKVVFVILEYHNWWIMKYENVLSHLTEY
PIIDFSGDKRTHCFPEAIVGSRIHDELTVDPSLMGNNKTIRDFRDLLDRAYWPRIRGLIQ
DEEREARMNKEKLVSSPSSESKMVATEEKKDLKKPKVVIIARNDSRAIMNEDSLVKMIED
IGFHVEVLRPQRTTELARIYRVLNSSDVMIGVHGAAMTHFLFMRPGSVFIQIIPLGTDWA
AGTYYGEPAVKLGLKYIGYKILPKESSLYDEYDKNDPVLMDPNSVNDRGWEFTKKIYLDR
QNVRLNLGRFRKRLLRAYYHSVANENERLRRQSQ

Transcript Sequence

Gene sequence data has not been registered.